euL1db
The European database of L1-HS retrotransposon insertions in humans

Home Background Search Browse Utilities Help FAQ Data Contact
Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

211 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip77 chr1 17229436 17229436 . unknown germline . no 269 .
srip100 chr1 18080834 18080834 - unknown germline . no 269 .
srip315 chr1 35992790 35992790 - unknown germline . no 269 KIAA0319L
srip660 chr1 49428746 49428746 - unknown germline . no 269 AGBL4
srip2052 chr1 83141075 83141075 + unknown germline . no 269 .
srip2077 chr1 83609736 83609736 - unknown germline . no 269 .
srip2399 chr1 90914505 90914505 + unknown germline . no 269 .
srip2678 chr1 101023627 101023627 - unknown germline . no 269 .
srip3064 chr1 102568917 102568917 + unknown germline . no 269 .
srip3186 chr1 105028221 105028221 + unknown germline . no 269 .
srip4118 chr1 149308428 149308428 + unknown germline . no 269 LOC645262
srip4484 chr1 158696208 158696208 - unknown germline . no 269 .
srip4590 chr1 163772794 163772794 - unknown germline . no 269 .
srip5058 chr1 169524865 169524865 + unknown germline . no 269 F5
srip6001 chr1 192262261 192262261 - unknown germline . no 269 .
srip6328 chr1 202496213 202496213 + unknown germline . no 269 PPP1R12B
srip7545 chr10 1427681 1427681 + unknown germline . no 269 ADARB2
srip7685 chr10 9525639 9525639 + unknown germline . no 269 .
srip7767 chr10 16031588 16031588 + unknown germline . no 269 .
srip8014 chr10 19216659 19216659 + unknown germline . no 269 .
srip8478 chr10 25707694 25707694 - unknown germline . no 269 GPR158
srip9582 chr10 68949319 68949319 + unknown germline . no 269 CTNNA3
srip9824 chr10 82972200 82972200 . unknown germline . no 269 .
srip11495 chr10 122662184 122662184 + unknown germline . no 269 WDR11
srip11831 chr10 124455224 124455224 + unknown germline . no 269 .
srip14404 chr11 41869867 41869867 + unknown germline . no 269 .
srip15162 chr11 57826791 57826791 - unknown germline . no 269 VN2R9P
srip15497 chr11 58512603 58512603 + unknown germline . no 269 .
srip16182 chr11 79630197 79630197 - unknown germline . no 269 .
srip17460 chr11 100712182 100712182 - unknown germline . no 269 ARHGAP42
srip17484 chr11 104040181 104040181 + unknown germline . no 269 .
srip17654 chr11 104556129 104556129 - unknown germline . no 269 .
srip18241 chr11 112084613 112084613 + unknown germline . no 269 BCO2
srip18325 chr11 119327948 119327948 - unknown germline . no 269 LOC100499227
srip18351 chr11 121131527 121131527 . unknown germline . no 269 .
srip19280 chr11 134305645 134305645 - unknown germline . no 269 .
srip19610 chr12 8105608 8105608 + unknown germline . no 269 .
srip20122 chr12 12933687 12933687 - unknown germline . no 269 APOLD1
srip20759 chr12 28226420 28226420 - unknown germline . no 269 .
srip21897 chr12 40147185 40147185 - unknown germline . no 269 .
srip22834 chr12 48929059 48929059 + unknown germline . no 269 .
srip25103 chr12 95808453 95808453 - unknown germline . no 269 .
srip26084 chr12 118186932 118186932 + unknown germline . no 269 KSR2
srip26371 chr12 126802936 126802936 - unknown germline . no 269 .
srip28327 chr13 55238024 55238024 + unknown germline . no 269 .
srip28587 chr13 61221163 61221163 - unknown germline . no 269 .
srip29750 chr13 64569846 64569846 - unknown germline . no 269 .
srip29790 chr13 64732422 64732422 - unknown germline . no 269 .
srip30587 chr13 78055084 78055084 + unknown germline . no 269 .
srip30991 chr13 79259790 79259790 - unknown germline . no 269 .
srip31995 chr13 86340151 86340151 - unknown germline . no 269 .
srip32315 chr13 91149416 91149416 - unknown germline . no 269 .
srip33519 chr13 104296230 104296230 - unknown germline . no 269 .
srip34049 chr13 107845335 107845335 + unknown germline . no 269 FAM155A
srip35208 chr14 28301256 28301256 + unknown germline . no 269 .
srip35511 chr14 31939857 31939857 - unknown germline . no 269 .
srip37872 chr14 67419872 67419872 - unknown germline . no 269 GPHN
srip38621 chr14 86381803 86381803 - unknown germline . no 269 .
srip39001 chr15 20069064 20069064 - unknown germline . no 269 .
srip39515 chr15 34031843 34031843 - unknown germline . no 269 RYR3
srip39850 chr15 38339255 38339255 - unknown germline . no 269 .
srip40242 chr15 47507335 47507335 - unknown germline . no 269 SEMA6D
srip40954 chr15 53956107 53956107 + unknown germline . no 269 WDR72
srip41230 chr15 56251143 56251143 + unknown germline . no 269 NEDD4
srip42523 chr15 83551628 83551628 - unknown germline . no 269 HOMER2
srip43021 chr15 98622503 98622503 + unknown germline . no 269 .
srip43270 chr15 100931152 100931152 - unknown germline . no 269 .
srip43457 chr16 5338657 5338657 + unknown germline . no 269 .
srip44098 chr16 17755307 17755307 - unknown germline . no 269 .
srip45223 chr16 33963307 33963307 - unknown germline . no 269 .
srip45323 chr16 33977028 33977028 - unknown germline . no 269 .
srip45521 chr16 33992437 33992437 . unknown germline . no 269 .
srip46344 chr16 71028016 71028016 + unknown germline . no 269 HYDIN
srip46381 chr16 76393377 76393377 - unknown germline . no 269 CNTNAP4
srip46554 chr17 6341651 6341651 - unknown germline . no 269 .
srip47220 chr17 28398310 28398310 + unknown germline . no 269 EFCAB5
srip47708 chr17 32813627 32813627 + unknown germline . no 269 .
srip49782 chr18 39896944 39896944 - unknown germline . no 269 .
srip50017 chr18 49216225 49216225 - unknown germline . no 269 .
srip50746 chr18 51762737 51762737 - unknown germline . no 269 .
srip55230 chr2 68049232 68049232 - unknown germline . no 269 .
srip55317 chr2 69168903 69168903 - unknown germline . no 269 .
srip55684 chr2 74087167 74087167 - unknown germline . no 269 STAMBP
srip55797 chr2 79929383 79929383 + unknown germline . no 269 CTNNA2
srip57831 chr2 132987069 132987069 . unknown germline . no 269 ANKRD30BL
srip57853 chr2 133033325 133033325 + unknown germline . no 269 .
srip58253 chr2 141852915 141852915 - unknown germline . no 269 LRP1B
srip59215 chr2 147020925 147020925 + unknown germline . no 269 .
srip60164 chr2 178676252 178676252 - unknown germline . no 269 PDE11A
srip60703 chr2 188759167 188759167 + unknown germline . no 269 .
srip61657 chr2 213114169 213114169 + unknown germline . no 269 ERBB4
srip62126 chr2 221503759 221503759 . unknown germline . no 269 .
srip62208 chr2 226439390 226439390 - unknown germline . no 269 KIAA1486
srip62460 chr2 232482732 232482732 + unknown germline . no 269 .
srip64049 chr20 25895497 25895497 - unknown germline . no 269 .
srip64063 chr20 25903871 25903871 - unknown germline . no 269 .
srip64091 chr20 26249103 26249103 + unknown germline . no 269 LOC100287605
srip65352 chr21 10725822 10725822 . unknown germline . no 269 .
srip66928 chr21 29069178 29069178 + unknown germline . no 269 .
srip70552 chr3 21234921 21234921 + unknown germline . no 269 .
srip71075 chr3 26524455 26524455 - unknown germline . no 269 .
srip71911 chr3 38626071 38626071 + unknown germline . no 269 SCN5A
srip73391 chr3 59852896 59852896 + unknown germline . no 269 FHIT
srip74029 chr3 79216306 79216306 + unknown germline . no 269 ROBO1
srip74855 chr3 82144859 82144859 - unknown germline . no 269 .
srip74959 chr3 83613995 83613995 + unknown germline . no 269 .
srip75681 chr3 85663361 85663361 - unknown germline . no 269 CADM2
srip75814 chr3 86264944 86264944 - unknown germline . no 269 .
srip76125 chr3 98775492 98775492 - unknown germline . no 269 .
srip78661 chr3 151148549 151148549 - unknown germline . no 269 MED12L
srip79468 chr3 166092232 166092232 + unknown germline . no 269 .
srip79684 chr3 169257514 169257514 + unknown germline . no 269 MECOM
srip80020 chr3 173917219 173917219 - unknown germline . no 269 NLGN1
srip81495 chr3 186372132 186372132 + unknown germline . no 269 .
srip81754 chr3 188234425 188234425 + unknown germline . no 269 LPP
srip82235 chr3 196253858 196253858 + unknown germline . no 269 .
srip82355 chr4 9451067 9451067 + unknown germline . no 269 DEFB131
srip82584 chr4 14849031 14849031 + unknown germline . no 269 .
srip82991 chr4 18162684 18162684 - unknown germline . no 269 .
srip83230 chr4 18194352 18194352 - unknown germline . no 269 .
srip83542 chr4 23129614 23129614 . unknown germline . no 269 .
srip84723 chr4 47007787 47007787 - unknown germline . no 269 .
srip85156 chr4 54090939 54090939 + unknown germline . no 269 SCFD2
srip86181 chr4 66413931 66413931 . unknown germline . no 269 EPHA5
srip86418 chr4 68264601 68264601 . unknown germline . no 269 .
srip86839 chr4 69653281 69653281 - unknown germline . no 269 .
srip87110 chr4 74488892 74488892 - unknown germline . no 269 .
srip87339 chr4 80768529 80768529 + unknown germline . no 269 GDEP
srip87748 chr4 83119438 83119438 - unknown germline . no 269 .
srip88899 chr4 103343749 103343749 + unknown germline . no 269 .
srip89610 chr4 110248324 110248324 - unknown germline . no 269 .
srip89688 chr4 111271156 111271156 . unknown germline . no 269 .
srip90026 chr4 114669461 114669461 - unknown germline . no 269 CAMK2D
srip90797 chr4 120717536 120717536 . unknown germline . no 269 .
srip90864 chr4 121137439 121137439 . unknown germline . no 269 .
srip90878 chr4 122918574 122918574 + unknown germline . no 269 .
srip91120 chr4 126052309 126052309 - unknown germline . no 269 .
srip92804 chr4 138177329 138177329 + unknown germline . no 269 .
srip92908 chr4 144516555 144516555 - unknown germline . no 269 FREM3
srip94051 chr4 165231734 165231734 - unknown germline . no 269 MARCH1
srip95389 chr4 190659702 190659702 . unknown germline . no 269 .
srip96290 chr5 11391269 11391269 + unknown germline . no 269 CTNND2
srip96979 chr5 23070275 23070275 + unknown germline . no 269 .
srip97759 chr5 33633341 33633341 - unknown germline . no 269 ADAMTS12
srip98295 chr5 40041340 40041340 - unknown germline . no 269 .
srip98539 chr5 45605628 45605628 - unknown germline . no 269 HCN1
srip99143 chr5 58596001 58596001 + unknown germline . no 269 PDE4D
srip99522 chr5 68263468 68263468 - unknown germline . no 269 .
srip100748 chr5 89450775 89450775 + unknown germline . no 269 .
srip100811 chr5 89939144 89939144 - unknown germline . no 269 GPR98
srip101471 chr5 100071606 100071606 + unknown germline . no 269 .
srip102708 chr5 112449709 112449709 - unknown germline . no 269 MCC
srip103607 chr5 135023720 135023720 . unknown germline . no 269 .
srip104215 chr5 144331004 144331004 - unknown germline . no 269 .
srip104304 chr5 145009363 145009363 + unknown germline . no 269 .
srip108178 chr6 39219886 39219886 . unknown germline . no 269 .
srip108939 chr6 56729304 56729304 - unknown germline . no 269 LOC100652827
srip109537 chr6 63368201 63368201 + unknown germline . no 269 .
srip110078 chr6 69198737 69198737 . unknown germline . no 269 .
srip110407 chr6 74649920 74649920 - unknown germline . no 269 .
srip110410 chr6 74758678 74758678 - unknown germline . no 269 .
srip111279 chr6 78749399 78749399 + unknown germline . no 269 .
srip111405 chr6 85929801 85929801 - unknown germline . no 269 .
srip112062 chr6 91669514 91669514 - unknown germline . no 269 .
srip112275 chr6 91767648 91767648 + unknown germline . no 269 .
srip113501 chr6 130848186 130848186 - unknown germline . no 269 .
srip114768 chr6 148195798 148195798 + unknown germline . no 269 .
srip114812 chr6 149477038 149477038 + unknown germline . no 269 .
srip115690 chr6 162181262 162181262 + unknown germline . no 269 PARK2
srip116212 chr7 10500040 10500040 . unknown germline . no 269 .
srip116301 chr7 17094708 17094708 + unknown germline . no 269 .
srip116601 chr7 26794912 26794912 + unknown germline . no 269 SKAP2
srip116903 chr7 41435725 41435725 - unknown germline . no 269 .
srip117228 chr7 52221989 52221989 - unknown germline . no 269 .
srip117457 chr7 52789459 52789459 + unknown germline . no 269 .
srip118325 chr7 62648965 62648965 - unknown germline . no 269 .
srip118881 chr7 70188682 70188682 - unknown germline . no 269 AUTS2
srip118966 chr7 76723953 76723953 + unknown germline . no 269 FAM185BP
srip119184 chr7 80761425 80761425 . unknown germline . no 269 .
srip119434 chr7 84329761 84329761 + unknown germline . no 269 .
srip119824 chr7 84901724 84901724 - unknown germline . no 269 .
srip120385 chr7 86719221 86719221 - unknown germline . no 269 .
srip120775 chr7 93146619 93146619 - unknown germline . no 269 CALCR
srip121133 chr7 105967886 105967886 + unknown germline . no 269 .
srip125695 chr8 35244887 35244887 + unknown germline . no 269 UNC5D
srip125784 chr8 40433182 40433182 - unknown germline . no 269 ZMAT4
srip128292 chr8 87315042 87315042 + unknown germline . no 269 .
srip128453 chr8 92186274 92186274 - unknown germline . no 269 LRRC69
srip128801 chr8 109649033 109649033 + unknown germline . no 269 .
srip128838 chr8 111632616 111632616 + unknown germline . no 269 .
srip129019 chr8 115773127 115773127 + unknown germline . no 269 .
srip131554 chr9 9236614 9236614 . unknown germline . no 269 PTPRD
srip132100 chr9 29260367 29260367 + unknown germline . no 269 .
srip133399 chr9 32463891 32463891 - unknown germline . no 269 DDX58
srip133614 chr9 34904794 34904794 - unknown germline . no 269 .
srip134707 chr9 100675542 100675542 - unknown germline . no 269 C9orf156
srip136277 chrX 4659603 4659603 - unknown germline . no 269 .
srip136318 chrX 11628385 11628385 - unknown germline . no 269 ARHGAP6
srip136761 chrX 23600445 23600445 + unknown germline . no 269 .
srip136922 chrX 37242568 37242568 + unknown germline . no 269 PRRG1
srip137242 chrX 54917144 54917144 + unknown germline . no 269 .
srip137793 chrX 61799456 61799456 + unknown germline . no 269 .
srip138513 chrX 73679072 73679072 . unknown germline . no 269 SLC16A2
srip139783 chrX 98264296 98264296 - unknown germline . no 269 .
srip140306 chrX 111229565 111229565 - unknown germline . no 269 TRPC5
srip140472 chrX 111557754 111557754 - unknown germline . no 269 ZCCHC16
srip141102 chrX 123611800 123611800 + unknown germline . no 269 ODZ1
srip141384 chrX 129525275 129525275 - unknown germline . no 269 .
srip141975 chrX 140515265 140515265 - unknown germline . no 269 .
srip142203 chrY 9914301 9914301 + unknown germline . no 269 .
srip142229 chrY 9951882 9951882 . unknown germline . no 269 .